Molecular modelling and computational structural biology 1100-3BB14

This course has not yet been described...

Prerequisites (description)

(in Polish) Zakres wiedzy z Pracowni Technologii Informacyjnej z I roku uznawany przez prowadzącego za podstawowy: znajomość edytora vi lub vim, podstawowe polecenia powłokowe (1.metaznaki (*,? i [...] oraz rozwijające nazwy ścieżek); 2.wyrażenia regularne (znak kropki, symbole: $, ^,*,[] i [^], {m,n}, (...), operatory rozszerzające w egrep i awk); 3.filtry (polecenia: grep, egrep, fgrep, cut, sort, uniq, tr, edytor strumieniowy sed, filtr tekstowy awk); 4.przeadresowania wejścia-wyjścia (operator: >, <, >>, <<[-]ogr, 2>, 2>&1, zmienna noclobber), 4.potoki (polecenie tee))- polecana książka "Linux Komendy i polecenia Praktyczne przykłady" K. Lal, T.Rak. Zakres wiedzy ze znajomości struktury i właściwości podstawowych aminokwasów - Biochemia L. Stryer.

Course coordinators

Krystiana Krzyśko

Learning outcomes

Students learn the basics of mathematical modeling and computer biomolecular systems, dynamics and simulation of selected regulatory processes using the methods of mechanic and molecular
dynamics, Monte-Carlo methods, molecular models, and the basics of systems theory. Students become familiar with well-known and popular molecular modeling and design packages as well as
the virtual reality technology. The lecture and exercises prepare students for independent modeling of biomolecular systems and designing of enzyme inhibitors – potential drugs.

Additional information

Information on level of this course, year of study and semester when the course unit is delivered, types and amount of class hours - can be found in course structure diagrams of apropriate study programmes. This course is related to the following study programmes:

Applications of Physics in Biology and Medicine, first cycle programme

Additional information (registration calendar, class conductors, localization and schedules of classes), might be available in the USOSweb system:

Description of 1100-3BB14 in USOSweb